OpenCodePapers

named-entity-recognition-ner-on-jnlpba

Named Entity Recognition (NER)
Dataset Link
Results over time
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PaperCodeF1ModelNameReleaseDate
Improving Biomedical Pretrained Language Models with Knowledge✓ Link82.0KeBioLM2021-04-21
Biomedical Named Entity Recognition at Scale✓ Link81.29BLSTM-CNN-Char (SparkNLP)2020-11-12
Biomedical Named Entity Recognition at Scale✓ Link81.29Spark NLP2020-11-12
Optimizing Bi-Encoder for Named Entity Recognition via Contrastive Learning✓ Link80.3BINDER2022-08-30
On the Effectiveness of Compact Biomedical Transformers✓ Link80.13BioMobileBERT2022-09-07
LinkBERT: Pretraining Language Models with Document Links✓ Link80.06BioLinkBERT (large)2022-03-29
On the Effectiveness of Compact Biomedical Transformers✓ Link79.97DistilBioBERT2022-09-07
On the Effectiveness of Compact Biomedical Transformers✓ Link79.88CompactBioBERT2022-09-07
Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing✓ Link79.1PubMedBERT uncased2020-07-31
On the Effectiveness of Compact Biomedical Transformers✓ Link79.1BioDistilBERT2022-09-07
Improving Biomedical Named Entity Recognition with Syntactic Information✓ Link77.83BioKMNER + BioBERT2020-11-25
[]()77.72aimped
BioBERT: a pre-trained biomedical language representation model for biomedical text mining✓ Link77.59BioBERT2019-01-25
SciFive: a text-to-text transformer model for biomedical literature✓ Link77.55SciFive-Large2021-05-28
BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks✓ Link77.03BioFLAIR2019-08-13
MINER: Improving Out-of-Vocabulary Named Entity Recognition from an Information Theoretic Perspective✓ Link77.03MINER2022-04-09
SciBERT: A Pretrained Language Model for Scientific Text✓ Link75.77SciBERT (Base Vocab)2019-03-26