Biomedical Named Entity Recognition at Scale

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Benchmark Model Rank Results
named-entity-recognition-ner-on-bc5cdrBLSTM-CNN-Char (SparkNLP)#7F1: 89.73
named-entity-recognition-ner-on-bc5cdrSpark NLP#8F1: 89.73
named-entity-recognition-ner-on-jnlpbaBLSTM-CNN-Char (SparkNLP)#2F1: 81.29
named-entity-recognition-ner-on-jnlpbaSpark NLP#3F1: 81.29
named-entity-recognition-ner-on-ncbi-diseaseBLSTM-CNN-Char (SparkNLP)#4F1: 89.13
named-entity-recognition-ner-on-ncbi-diseaseSpark NLP#5F1: 89.13
named-entity-recognition-on-anatemBLSTM-CNN-Char (SparkNLP)#3F1: 89.13
named-entity-recognition-on-bc2gmSpark NLP#1F1: 88.75
named-entity-recognition-on-bc4chemdBLSTM-CNN-Char (SparkNLP)#2F1: 93.72
named-entity-recognition-on-bc5cdr-chemicalSpark NLP#1F1: 94.88
named-entity-recognition-on-bionlp13-cgBLSTM-CNN-Char (SparkNLP)#1F1: 85.58
named-entity-recognition-on-linnaeusBLSTM-CNN-Char (SparkNLP)#1F1: 86.26
named-entity-recognition-on-linnaeusSpark NLP#2F1: 86.26
named-entity-recognition-on-species-800Spark NLP#4F1: 80.91

Rank counts only results with a code link.