Molecular Fingerprints Are Strong Models for Peptide Function Prediction

Benchmark Model Rank Results
graph-classification-on-peptides-funcECFP + LightGBM#2AP: 0.7460
graph-classification-on-peptides-funcTT + LightGBM#4AP: 0.7318
graph-classification-on-peptides-funcRDKit + LightGBM#6AP: 0.7311
graph-regression-on-peptides-structECFP + LightGBM#4MAE: 0.2432
graph-regression-on-peptides-structTT + LightGBM#5MAE: 0.2438
graph-regression-on-peptides-structRDKit + LightGBM#9MAE: 0.2459