OpenCodePapers

named-entity-recognition-on-bc5cdr-disease

Named Entity Recognition (NER)
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PaperCodeF1ModelNameReleaseDate
BioMegatron: Larger Biomedical Domain Language Model✓ Link88.5BioMegatron2020-10-12
Hero-Gang Neural Model For Named Entity Recognition✓ Link87.86HGN2022-05-15
SciFive: a text-to-text transformer model for biomedical literature✓ Link87.62SciFive-Large2021-05-28
Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets✓ Link86.6NCBI_BERT(base) (P)2019-06-13
LinkBERT: Pretraining Language Models with Document Links✓ Link86.39BioLinkBERT (large)2022-03-29
Improving Biomedical Pretrained Language Models with Knowledge✓ Link86.1KeBioLM2021-04-21
On the Effectiveness of Compact Biomedical Transformers✓ Link85.61BioDistilBERT2022-09-07
On the Effectiveness of Compact Biomedical Transformers✓ Link85.42DistilBioBERT2022-09-07
On the Effectiveness of Compact Biomedical Transformers✓ Link85.38CompactBioBERT2022-09-07
On the Effectiveness of Compact Biomedical Transformers✓ Link84.62BioMobileBERT2022-09-07