TransformerCPI: improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments

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Benchmark	Model	Rank	Results
drug-discovery-on-bindingdb	TransformerCPI	#3	AUC: 0.937
drug-discovery-on-lit-pcba-aldh1	TransformerCPI	#3	AUC: 0.694
drug-discovery-on-lit-pcba-esr1-ant	TransformerCPI	#2	AUC: 0.616
drug-discovery-on-lit-pcba-kat2a	TransformerCPI	#3	AUC: 0.650
drug-discovery-on-lit-pcba-mapk1	TransformerCPI	#3	AUC: 0.683