OpenCodePapers

text-based-de-novo-molecule-generation-on

Text-based de novo Molecule Generation
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PaperCodeBLEUExact MatchFrechet ChemNet Distance (FCD)LevenshteinMACCS FTSMorgan FTSRDK FTSText2MolValidityParameter CountModelNameReleaseDate
LDMol: Text-to-Molecule Diffusion Model with Structurally Informative Latent Space✓ Link92.653.30.206.75097.393.195.094.1LDMol2024-05-28
MolReFlect: Towards Fine-grained In-Context Alignment between Molecules and Texts90.351.011.8492.981.386.097.7MolReFlect2024-11-22
BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning✓ Link87.252.20.35312.77690.777.983.557.9100252000000BioT5+2024-02-27
BioT5: Enriching Cross-modal Integration in Biology with Chemical Knowledge and Natural Language Associations✓ Link86.741.3.4315.09788.673.480.157.6100252000000BioT52023-10-11
Empowering Molecule Discovery for Molecule-Caption Translation with Large Language Models: A ChatGPT Perspective✓ Link85.728.00.4117.1490.373.980.559.389.9NoneMolReGPT (GPT-4-0413)2023-06-11
Translation between Molecules and Natural Language✓ Link85.430.21.2016.0783.468.474.655.490.5770000000MolT5-Large2022-04-25
Unifying Molecular and Textual Representations via Multi-task Language Modelling✓ Link85.332.2.0516.8790.175.781.694.3220000000Text+Chem T5-augm base2023-01-29
Text-Guided Molecule Generation with Diffusion Language Model✓ Link82.824.20.8916.89787.472.277.158.978.9180000000TGM-DLM w/o corr2024-02-20
Text-Guided Molecule Generation with Diffusion Language Model✓ Link82.624.20.7717.00385.468.873.958.187.1180000000TGM-DLM2024-02-20
MolFM: A Multimodal Molecular Foundation Model✓ Link82.221.019.44585.475.869.758.389.2296200000MolFM-Base2023-06-06
Unifying Molecular and Textual Representations via Multi-task Language Modelling✓ Link81.519.10.0621.7886.467.274.495.160000000Text+Chem T5-augm small2023-01-29
Translation between Molecules and Natural Language✓ Link81.031.40.4416.75887.272.278.659.099.6770000000MolT5-Large-HV2022-04-25
MolFM: A Multimodal Molecular Foundation Model✓ Link80.316.920.86883.472.166.257.385.913620000MolFM-Small2023-06-06
Empowering Molecule Discovery for Molecule-Caption Translation with Large Language Models: A ChatGPT Perspective✓ Link79.013.90.5724.9184.762.470.857.188.7MolReGPT (GPT-3.5-turbo)2023-06-11
Translation between Molecules and Natural Language✓ Link76.98.12.1824.45872.152.958.849.677.2220000000MolT5-base2022-04-25
GIT-Mol: A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text✓ Link75.65.126.31573.851.958.292.8GIT-Mol-caption2023-08-14
Translation between Molecules and Natural Language✓ Link75.57.92.4925.98870.351.756.848.272.160000000MolT5-small2022-04-25
Unifying Molecular and Textual Representations via Multi-task Language Modelling✓ Link7521.20.06127.3987.469.776.779.2220000000Text+Chem T5 base2023-01-29
Unifying Molecular and Textual Representations via Multi-task Language Modelling✓ Link73.915.70.06628.5485.96673.677.660000000Text+Chem T5 small2023-01-29
MolXPT: Wrapping Molecules with Text for Generative Pre-training✓ Link21.50.4585.966.775.757.898.3350000000MolXPT2023-05-18